Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901776.1_cds_XP_016451824.1_46130
CDS Infomation

[gene=LOC107776442] [db_xref=GeneID:107776442] [protein=arginine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016451824.1] [location=complement(join(19467..19577,19994..20092,20198..20266,20489..20578,20874..20943,21529..21598,21749..21935,22045..22129,22281..22459,24227..24331,24551..24634,25068..25148,25689..25904,25998..26099,26208..26283,26406..26545,26638..26646))] [gbkey=CDS]
Sequence

ATGGAAACTGATAAAGAAAGTATTGGGAGTCTAAAGCAGCAATTAGCGAAGCTATTTGAG
GAATCACTTCGAGCAGCATTCCCTGATATTTCAGATGTGCAGCCTTTGGTTGCTATTTGC
AATGATCCAAAAAATGGTGACTATCAATGCAATAATGCAATGAGCTTGTGGAATAAAATT
AAAGGCAAAGGTACACAGTTCAAGGGTCCTCAACCTGTTGGAAAGTCAATTGTAGAAAAC
CTTCCTGCATCGGACATGATAGAGAATTGTTCTATAGCAGGACCTGGTTTCATTAATATT
GTATTAGCAAGGCAATGGATAGCAAAGAGCGTTCAAAAGATGCTAATAGATGGCATCGAG
ACATGGGCACCGAAGCTTCCTGTTAAAAGGACGGTTGTTGACTTTTCATCACCCAACATA
GCAAAAGAGATGCATGTTGGTCATTTAAGATCTACTATTATTGGAGACACTTTAGCCCGT
ATGCTGGAGTTTTCCAATGTTGAAGTTCTTCGGAGAAACCATGTCGGTGATTGGGGCACA
CAGTTCGGAATGTTAATTGAGTTCCTTTTTGAAAAATTTCCGAACTGGGAAGCTGGTAGT
ACTCCAGCGATTGGAGATTTGGAGGCATTCTATAAGGCGTCAAAACAAAGATTTGATAGT
GATCCTGATTTTAAGGAAAGGGCGCAAAAGGCAGTTGTTAGTCTTCAGGGTGGGGATGAG
AAGTATAGAAAGGCGTGGGCGCAAATATGTGAAATCAGCCGAAAAGAATTTCAGAAGGTG
TATGAGAGACTTGGAGTTCACTTAGAGGAAAAGGGTGAAAGCTTTTATAATCCATATATT
CCCAAGGCTTTGGAGTTGCTTAATGAGAAAGGATTAATTGAAGAAAGTGAAGGAGCTCGT
GTTATCTTTATTGAAGGGAAGAAAATACCTCTTATTGTTGTGAAGAGGGATGGTGGTTTC
AACTACGCTTCAACAGATCTTACTGCTCTATGGTATCGGCTTAATGAAGAAAAAGCAGAC
TGGATGATATATGTGACTGACGTTGGCCAGCGAGAGCACTTTGAAATGTTCTTTTCTGCT
GCAAAACATGCGGGTTGGCTTCCCTCTAACGAGAATGATTATCCCAAAGCTAGTCATGTA
GGATTTGGTCTAGTTTTAGGAGAAGACGGGAAACGGTTCCGTACGCGAAGTACTGAGGTG
GTGAAGCTGGTTGATTTGCTTGATGAGGCCAAAAGCCGGTGTAAATTAGCACTTGAAGAA
AGAGGTAAGGCTAAAGAATGGACAGCTGAGGAACTGGATCAAACTGCTGAAGCAGTAGGA
TACGGTGCTGTTAAATATGCTGACCTGAAGAACAACAGGTTGACTAATTACACCTTCAAT
TTCGATCAGATGCTTAGTGATAAGGGAAATACCGCTGTGTATTTACTGTATGCACATGCT
CGCATTTGTTCAATCATCAGGAAGTCGGGTAGAGATATAGAGGAGTTAAAAAAGAGTGGG
GCGATGGATTTGGCTCATCAAGATGAACGCATGTTAGGACTCCATTTGCTCCAATTTCCT
GAAATTGTTGAAGAAGCTTGTACCAATCTTTTGCCCAACTTGTTGTGTGAATATCTTTAC
AAATTATCTGAAGACTTCACTAAATTCTATACCAACTGTCAGGTCGTTGGCTCGGATGAG
GAAACAAGCAGACTCTTGCTTTGCGAGGCAACAGCACTTGTCATGAGAAAGTGTTTCCAT
CTTTTGGGTATCACTCCTGTTTACAAAATATGA

Peptide Sequence

PEP ID

XP_016451824.1
PEP Infomation

PREDICTED: arginine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

METDKESIGSLKQQLAKLFEESLRAAFPDISDVQPLVAICNDPKNGDYQCNNAMSLWNKI
KGKGTQFKGPQPVGKSIVENLPASDMIENCSIAGPGFINIVLARQWIAKSVQKMLIDGIE
TWAPKLPVKRTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGT
QFGMLIEFLFEKFPNWEAGSTPAIGDLEAFYKASKQRFDSDPDFKERAQKAVVSLQGGDE
KYRKAWAQICEISRKEFQKVYERLGVHLEEKGESFYNPYIPKALELLNEKGLIEESEGAR
VIFIEGKKIPLIVVKRDGGFNYASTDLTALWYRLNEEKADWMIYVTDVGQREHFEMFFSA
AKHAGWLPSNENDYPKASHVGFGLVLGEDGKRFRTRSTEVVKLVDLLDEAKSRCKLALEE
RGKAKEWTAEELDQTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLSDKGNTAVYLLYAHA
RICSIIRKSGRDIEELKKSGAMDLAHQDERMLGLHLLQFPEIVEEACTNLLPNLLCEYLY
KLSEDFTKFYTNCQVVGSDEETSRLLLCEATALVMRKCFHLLGITPVYKI

Transcript Sequence

Gene sequence data has not been registered.